diff --git a/README.md b/README.md
index ab908be..e834006 100644
--- a/README.md
+++ b/README.md
@@ -12,7 +12,7 @@ In order to use this sample, you should have:
# Running Locally
-The easiest way to run this server is to run it directly in Maven using a built-in Jetty server. To do this, execute the following command:
+The easiest way to run this server is to run it directly in Maven using a built-in Jetty server. To do this, change `src/main/resources/hapi.properties` `server_address` and `server.base` with the values commented out as *For Jetty, use this* and then execute the following command:
```
mvn jetty:run
@@ -20,7 +20,7 @@ mvn jetty:run
Then, browse to the following link to use the server:
-[http://localhost:8080/](http://localhost:8080/)
+[http://localhost:8080/hapi-fhir-jpaserver/](http://localhost:8080/hapi-fhir-jpaserver/)
# Deploying to a Container
@@ -40,7 +40,7 @@ This will create a file called `hapi-fhir-jpaserver.war` in your `target` direct
Again, browse to the following link to use the server (note that the port 8080 may not be correct depending on how your server is configured).
-[http://localhost:8080/](http://localhost:8080/)
+[http://localhost:8080/hapi-fhir-jpaserver/](http://localhost:8080/hapi-fhir-jpaserver/)
# Customizing The Web Testpage UI
@@ -56,13 +56,21 @@ Much of this HAPI starter project can be configured using the properties file in
## MySql
-To configure the starter app to with MySQL, use the commands below to add user and database:
+To configure the starter app to use MySQL, instead of the default Derby:
+> Add user and database on your mysql server via mysql cli
```
-CREATE USER 'fhirUser'@'localhost' IDENTIFIED BY 'fhirPass';
-CREATE DATABASE fhir_r4;
-GRANT ALL PRIVILEGES ON fhir_r4.* to 'fhirUser'@'localhost';
+CREATE USER 'hapiDbUser'@'localhost' IDENTIFIED BY 'hapiDbPass';
+CREATE DATABASE hapi_dstu3;
+GRANT ALL PRIVILEGES ON hapi_dstu3.* to 'hapiDbUser'@'localhost';
FLUSH PRIVILEGES;
```
+> Update hapi.properties file to have the following
+* @line34 datasource.driver=com.mysql.cj.jdbc.Driver
+* @line35 datasource.url=jdbc:mysql://localhost:3306/hapi_dstu3
+* @line36 datasource.username=hapiDbUser
+* @line37 datasource.password=hapiDbPass
+* @line41 hibernate.dialect=org.hibernate.dialect.MySQL5Dialect
+
It is important to use MySQL5Dialect when using MySQL version 5+.
diff --git a/pom.xml b/pom.xml
index ca54c6b..350b5ed 100644
--- a/pom.xml
+++ b/pom.xml
@@ -204,7 +204,7 @@
9.4.8.v20180619
- /
+ /hapi-fhir-jpaserver
true
diff --git a/src/main/java/ca/uhn/fhir/jpa/starter/HapiProperties.java b/src/main/java/ca/uhn/fhir/jpa/starter/HapiProperties.java
index 58e08da..44f1b0c 100644
--- a/src/main/java/ca/uhn/fhir/jpa/starter/HapiProperties.java
+++ b/src/main/java/ca/uhn/fhir/jpa/starter/HapiProperties.java
@@ -41,6 +41,8 @@ public class HapiProperties {
static final String SUBSCRIPTION_WEBSOCKET_ENABLED = "subscription.websocket.enabled";
static final String TEST_PORT = "test.port";
static final String TESTER_CONFIG_REFUSE_TO_FETCH_THIRD_PARTY_URLS = "tester.config.refuse_to_fetch_third_party_urls";
+ static final String CORS_ENABLED = "cors.enabled";
+ static final String CORS_ALLOWED_ORIGIN = "cors.allowed_origin";
private static Properties properties;
@@ -255,6 +257,14 @@ public class HapiProperties {
return HapiProperties.getBooleanProperty(TESTER_CONFIG_REFUSE_TO_FETCH_THIRD_PARTY_URLS, false);
}
+ public static Boolean getCorsEnabled() {
+ return HapiProperties.getBooleanProperty(CORS_ENABLED, true);
+ }
+
+ public static String getCorsAllowedOrigin() {
+ return HapiProperties.getProperty(CORS_ALLOWED_ORIGIN, "*");
+ }
+
public static String getServerBase() {
return HapiProperties.getProperty(SERVER_BASE, "/fhir");
}
diff --git a/src/main/java/ca/uhn/fhir/jpa/starter/JpaRestfulServer.java b/src/main/java/ca/uhn/fhir/jpa/starter/JpaRestfulServer.java
index ef08924..c0a3403 100644
--- a/src/main/java/ca/uhn/fhir/jpa/starter/JpaRestfulServer.java
+++ b/src/main/java/ca/uhn/fhir/jpa/starter/JpaRestfulServer.java
@@ -5,7 +5,6 @@ import ca.uhn.fhir.context.FhirVersionEnum;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.IFhirSystemDao;
import ca.uhn.fhir.jpa.model.interceptor.executor.InterceptorService;
-import ca.uhn.fhir.jpa.model.interceptor.api.IInterceptorRegistry;
import ca.uhn.fhir.jpa.provider.JpaConformanceProviderDstu2;
import ca.uhn.fhir.jpa.provider.JpaSystemProviderDstu2;
import ca.uhn.fhir.jpa.provider.SubscriptionTriggeringProvider;
@@ -18,8 +17,6 @@ import ca.uhn.fhir.jpa.provider.r4.TerminologyUploaderProviderR4;
import ca.uhn.fhir.jpa.search.DatabaseBackedPagingProvider;
import ca.uhn.fhir.jpa.subscription.SubscriptionInterceptorLoader;
import ca.uhn.fhir.jpa.subscription.module.interceptor.SubscriptionDebugLogInterceptor;
-import ca.uhn.fhir.jpa.subscription.SubscriptionActivatingInterceptor;
-import ca.uhn.fhir.jpa.subscription.SubscriptionMatcherInterceptor;
import ca.uhn.fhir.model.dstu2.composite.MetaDt;
import ca.uhn.fhir.narrative.DefaultThymeleafNarrativeGenerator;
import ca.uhn.fhir.rest.server.HardcodedServerAddressStrategy;
@@ -175,29 +172,30 @@ public class JpaRestfulServer extends RestfulServer {
// Define your CORS configuration. This is an example
// showing a typical setup. You should customize this
// to your specific needs
- CorsConfiguration config = new CorsConfiguration();
- config.addAllowedHeader("x-fhir-starter");
- config.addAllowedHeader("Origin");
- config.addAllowedHeader("Accept");
- config.addAllowedHeader("X-Requested-With");
- config.addAllowedHeader("Content-Type");
+ if(HapiProperties.getCorsEnabled()) {
+ CorsConfiguration config = new CorsConfiguration();
+ config.addAllowedHeader("x-fhir-starter");
+ config.addAllowedHeader("Origin");
+ config.addAllowedHeader("Accept");
+ config.addAllowedHeader("X-Requested-With");
+ config.addAllowedHeader("Content-Type");
- config.addAllowedOrigin("*");
+ config.addAllowedOrigin(HapiProperties.getCorsAllowedOrigin());
- config.addExposedHeader("Location");
- config.addExposedHeader("Content-Location");
- config.setAllowedMethods(Arrays.asList("GET", "POST", "PUT", "DELETE", "OPTIONS", "PATCH"));
+ config.addExposedHeader("Location");
+ config.addExposedHeader("Content-Location");
+ config.setAllowedMethods(Arrays.asList("GET", "POST", "PUT", "DELETE", "OPTIONS", "PATCH"));
- // Create the interceptor and register it
- CorsInterceptor interceptor = new CorsInterceptor(config);
- registerInterceptor(interceptor);
+ // Create the interceptor and register it
+ CorsInterceptor interceptor = new CorsInterceptor(config);
+ registerInterceptor(interceptor);
+ }
// If subscriptions are enabled, we want to register the interceptor that
// will activate them and match results against them
if (HapiProperties.getSubscriptionWebsocketEnabled() ||
HapiProperties.getSubscriptionEmailEnabled() ||
HapiProperties.getSubscriptionRestHookEnabled()) {
-
// Loads subscription interceptors (SubscriptionActivatingInterceptor, SubscriptionMatcherInterceptor)
// with activation of scheduled subscription
SubscriptionInterceptorLoader subscriptionInterceptorLoader = appCtx.getBean(SubscriptionInterceptorLoader.class);
@@ -206,7 +204,6 @@ public class JpaRestfulServer extends RestfulServer {
// Subscription debug logging
InterceptorService interceptorService = (InterceptorService) appCtx.getBean("interceptorService");
interceptorService.registerInterceptor(new SubscriptionDebugLogInterceptor());
-
}
}
diff --git a/src/main/resources/hapi.properties b/src/main/resources/hapi.properties
index 7c049de..6e53091 100644
--- a/src/main/resources/hapi.properties
+++ b/src/main/resources/hapi.properties
@@ -1,27 +1,29 @@
# Adjust this to set the version of FHIR supported by this server. See
# FhirVersionEnum for a list of available constants.
-fhir_version=R4
+fhir_version=DSTU3
# This is the address that the FHIR server will report as its own address.
# If this server will be deployed (for example) to an internet accessible
# server, put the DNS name of that server here.
-server_address=http://localhost:8080/fhir/
+#server_address=http://localhost/fhir/
# For Jetty, use this:
-# server_address=http://localhost:8080/hapi-fhir-jpaserver/fhir/
+server_address=http://localhost:8080/hapi-fhir-jpaserver/fhir/
# This is the context path for the FHIR endpoint. If this is changed, the
# setting above should also be changed.
-server.base=/fhir
+#server.base=/fhir
# For Jetty, use this:
-# server.base=/hapi-fhir-jpaserver/fhir
+server.base=/hapi-fhir-jpaserver/fhir
default_encoding=JSON
etag_support=ENABLED
default_page_size=20
max_page_size=200
+allow_override_default_search_params=true
+allow_contains_searches=true
allow_multiple_delete=true
allow_external_references=true
allow_placeholder_references=true
@@ -31,14 +33,14 @@ logger.name=fhirtest.access
logger.format=Path[${servletPath}] Source[${requestHeader.x-forwarded-for}] Operation[${operationType} ${operationName} ${idOrResourceName}] UA[${requestHeader.user-agent}] Params[${requestParameters}] ResponseEncoding[${responseEncodingNoDefault}]
logger.error_format=ERROR - ${requestVerb} ${requestUrl}
logger.log_exceptions=true
-datasource.driver=com.mysql.cj.jdbc.Driver
-datasource.url=jdbc:mysql://localhost:3306/fhir_r4
-datasource.username=fhirUser
-datasource.password=fhirPass
+datasource.driver=org.apache.derby.jdbc.EmbeddedDriver
+datasource.url=jdbc:derby:directory:target/jpaserver_derby_files;create=true
+datasource.username=
+datasource.password=
server.name=Local Tester
server.id=home
test.port=
-hibernate.dialect=org.hibernate.dialect.MySQL5Dialect
+hibernate.dialect=ca.uhn.fhir.jpa.util.DerbyTenSevenHapiFhirDialect
hibernate.search.model_mapping=ca.uhn.fhir.jpa.search.LuceneSearchMappingFactory
hibernate.format_sql=false
hibernate.show_sql=false
@@ -52,7 +54,8 @@ hibernate.search.default.directory_provider=filesystem
hibernate.search.default.indexBase=target/lucenefiles
hibernate.search.lucene_version=LUCENE_CURRENT
tester.config.refuse_to_fetch_third_party_urls=false
-
+cors.enabled=true
+cors.allowed_origin=*
##################################################
# Subscriptions
diff --git a/src/test/java/ca/uhn/fhir/jpa/starter/ExampleServerR4IT.java b/src/test/java/ca/uhn/fhir/jpa/starter/ExampleServerR4IT.java
index 6858b41..3364371 100644
--- a/src/test/java/ca/uhn/fhir/jpa/starter/ExampleServerR4IT.java
+++ b/src/test/java/ca/uhn/fhir/jpa/starter/ExampleServerR4IT.java
@@ -22,9 +22,9 @@ import org.junit.AfterClass;
import org.junit.BeforeClass;
import org.junit.Test;
-import java.io.File;
import java.io.IOException;
import java.net.URI;
+import java.nio.file.Paths;
import java.util.concurrent.Future;
import java.util.concurrent.TimeUnit;
@@ -131,13 +131,7 @@ public class ExampleServerR4IT {
@BeforeClass
public static void beforeClass() throws Exception {
- /*
- * This runs under maven, and I'm not sure how else to figure out the target directory from code..
- */
- String path = ExampleServerR4IT.class.getClassLoader().getResource(".keep_hapi-fhir-jpaserver-starter").getPath();
- path = new File(path).getParent();
- path = new File(path).getParent();
- path = new File(path).getParent();
+ String path = Paths.get("").toAbsolutePath().toString();
ourLog.info("Project base path is: {}", path);