Personal-Twin/hapi-fhir-jpaserver-starter
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This commit is contained in:
Justin McKelvy
2023-09-18 18:41:34 -06:00
parent 1bb6e9e610 bfa85ceec9
commit 4ac5f03a0d
38 changed files with 447 additions and 391 deletions
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130
src/main/java/ca/uhn/fhir/jpa/starter/AppProperties.java
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@@ -1,32 +1,32 @@
package ca.uhn.fhir.jpa.starter;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.Objects;
import ca.uhn.fhir.context.FhirVersionEnum;
import ca.uhn.fhir.jpa.api.config.JpaStorageSettings.ClientIdStrategyEnum;
import ca.uhn.fhir.jpa.model.entity.NormalizedQuantitySearchLevel;
import ca.uhn.fhir.jpa.packages.PackageInstallationSpec;
import ca.uhn.fhir.rest.api.EncodingEnum;
import org.cqframework.cql.cql2elm.CqlCompilerException;
import org.cqframework.cql.cql2elm.CqlTranslator;
import org.cqframework.cql.cql2elm.CqlTranslatorOptions;
import org.cqframework.cql.cql2elm.LibraryBuilder;
import org.hl7.fhir.r4.model.Bundle;
import org.springframework.boot.context.properties.ConfigurationProperties;
import org.springframework.boot.context.properties.EnableConfigurationProperties;
import org.springframework.context.annotation.Configuration;
import com.google.common.collect.ImmutableList;
import ca.uhn.fhir.context.FhirVersionEnum;
import ca.uhn.fhir.jpa.api.config.JpaStorageSettings.ClientIdStrategyEnum;
import ca.uhn.fhir.jpa.model.entity.NormalizedQuantitySearchLevel;
import ca.uhn.fhir.rest.api.EncodingEnum;
import java.util.ArrayList;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Objects;
import java.util.Set;
@ConfigurationProperties(prefix = "hapi.fhir")
@Configuration
@EnableConfigurationProperties
public class AppProperties {
private Boolean cr_enabled = false;
//cql settings
private Boolean cql_use_embedded_libraries = true;
private Boolean cql_runtime_debug_logging_enabled = false;
@@ -56,7 +56,6 @@ public class AppProperties {
// Care-gaps Settings
private String caregaps_reporter = "default";
private String caregaps_section_author = "default";
private Boolean cr_enabled = false;
private Boolean ips_enabled = false;
private Boolean openapi_enabled = false;
private Boolean mdm_enabled = false;
@@ -68,6 +67,7 @@ public class AppProperties {
private Boolean allow_multiple_delete = false;
private Boolean allow_override_default_search_params = true;
private Boolean auto_create_placeholder_reference_targets = false;
private final Set<String> auto_version_reference_at_paths = new HashSet<>();
private Boolean dao_scheduling_enabled = true;
private Boolean delete_expunge_enabled = false;
private Boolean enable_index_missing_fields = false;
@@ -98,17 +98,21 @@ public class AppProperties {
private List<String> supported_resource_types = new ArrayList<>();
private List<Bundle.BundleType> allowed_bundle_types = null;
private Boolean narrative_enabled = true;
private Validation validation = new Validation();
private Map<String, Tester> tester = new HashMap<>();
private Map<String, Tester> tester = null;
private Logger logger = new Logger();
private Subscription subscription = new Subscription();
private Cors cors = null;
private Partitioning partitioning = null;
private Boolean install_transitive_ig_dependencies = true;
private Boolean reload_existing_implementationguides = false;
private Map<String, ImplementationGuide> implementationGuides = null;
private Map<String, PackageInstallationSpec> implementationGuides = null;
private String staticLocation = null;
private String staticLocationPrefix = "/static";
private Boolean lastn_enabled = false;
private boolean store_resource_in_lucene_index_enabled = false;
private NormalizedQuantitySearchLevel normalized_quantity_search_level = NormalizedQuantitySearchLevel.NORMALIZED_QUANTITY_SEARCH_NOT_SUPPORTED;
@@ -118,14 +122,24 @@ public class AppProperties {
private Integer bundle_batch_pool_size = 20;
private Integer bundle_batch_pool_max_size = 100;
private final List<String> local_base_urls = new ArrayList<>();
private final Set<String> local_base_urls = new HashSet<>();
private final List<String> custom_interceptor_classes = new ArrayList<>();
public String getStaticLocationPrefix() {
return staticLocationPrefix;
}
public void setStaticLocationPrefix(String staticLocationPrefix) {
this.staticLocationPrefix = staticLocationPrefix;
}
public List<String> getCustomInterceptorClasses() {
return custom_interceptor_classes;
}
public String getStaticLocation() {
return staticLocation;
}
@@ -134,6 +148,7 @@ public class AppProperties {
this.staticLocation = staticLocation;
}
public Boolean getOpenapi_enabled() {
return openapi_enabled;
}
@@ -166,11 +181,11 @@ public class AppProperties {
this.defer_indexing_for_codesystems_of_size = defer_indexing_for_codesystems_of_size;
}
public Map<String, ImplementationGuide> getImplementationGuides() {
public Map<String, PackageInstallationSpec> getImplementationGuides() {
return implementationGuides;
}
public void setImplementationGuides(Map<String, ImplementationGuide> implementationGuides) {
public void setImplementationGuides(Map<String, PackageInstallationSpec> implementationGuides) {
this.implementationGuides = implementationGuides;
}
@@ -182,6 +197,14 @@ public class AppProperties {
this.partitioning = partitioning;
}
public Boolean getCr_enabled() {
return cr_enabled;
}
public void setCr_enabled(Boolean cr_enabled) {
this.cr_enabled = cr_enabled;
}
public boolean isCqlUseEmbeddedLibraries() {
return cql_use_embedded_libraries;
}
@@ -382,14 +405,6 @@ public class AppProperties {
this.cql_compiler_translator_format = cqlTranslatorFormat;
}
public Boolean getCr_enabled() {
return cr_enabled;
}
public void setCr_enabled(Boolean cr_enabled) {
this.cr_enabled = cr_enabled;
}
public String getCareGapsReporter() {
return caregaps_reporter;
}
@@ -401,6 +416,7 @@ public class AppProperties {
public void setCareGapsReporter(String theCareGapsReporter) {
this.caregaps_reporter = theCareGapsReporter;
}
public Boolean getIps_enabled() {
return ips_enabled;
}
@@ -409,6 +425,7 @@ public class AppProperties {
this.ips_enabled = ips_enabled;
}
public Boolean getMdm_enabled() {
return mdm_enabled;
}
@@ -486,7 +503,7 @@ public class AppProperties {
}
public void setClient_id_strategy(
ClientIdStrategyEnum client_id_strategy) {
ClientIdStrategyEnum client_id_strategy) {
this.client_id_strategy = client_id_strategy;
}
@@ -535,7 +552,7 @@ public class AppProperties {
}
public void setAllow_override_default_search_params(
Boolean allow_override_default_search_params) {
Boolean allow_override_default_search_params) {
this.allow_override_default_search_params = allow_override_default_search_params;
}
@@ -544,10 +561,14 @@ public class AppProperties {
}
public void setAuto_create_placeholder_reference_targets(
Boolean auto_create_placeholder_reference_targets) {
Boolean auto_create_placeholder_reference_targets) {
this.auto_create_placeholder_reference_targets = auto_create_placeholder_reference_targets;
}
public Set<String> getAuto_version_reference_at_paths() {
return auto_version_reference_at_paths;
}
public Integer getDefault_page_size() {
return default_page_size;
}
@@ -601,7 +622,7 @@ public class AppProperties {
}
public void setEnforce_referential_integrity_on_delete(
Boolean enforce_referential_integrity_on_delete) {
Boolean enforce_referential_integrity_on_delete) {
this.enforce_referential_integrity_on_delete = enforce_referential_integrity_on_delete;
}
@@ -610,7 +631,7 @@ public class AppProperties {
}
public void setEnforce_referential_integrity_on_write(
Boolean enforce_referential_integrity_on_write) {
Boolean enforce_referential_integrity_on_write) {
this.enforce_referential_integrity_on_write = enforce_referential_integrity_on_write;
}
@@ -746,11 +767,13 @@ public class AppProperties {
this.tester = tester;
}
public Boolean getNarrative_enabled() {
public Boolean getNarrative_enabled()
{
return narrative_enabled;
}
public void setNarrative_enabled(Boolean narrative_enabled) {
public void setNarrative_enabled(Boolean narrative_enabled)
{
this.narrative_enabled = narrative_enabled;
}
@@ -810,13 +833,13 @@ public class AppProperties {
this.bundle_batch_pool_max_size = bundle_batch_pool_max_size;
}
public List<String> getLocal_base_urls() {
public Set<String> getLocal_base_urls() {
return local_base_urls;
}
public static class Cors {
private Boolean allow_Credentials = true;
private List<String> allowed_origin = ImmutableList.of("*");
private List<String> allowed_origin = List.of("*");
public List<String> getAllowed_origin() {
return allowed_origin;
@@ -834,6 +857,7 @@ public class AppProperties {
this.allow_Credentials = allow_Credentials;
}
}
public static class Logger {
@@ -876,6 +900,7 @@ public class AppProperties {
}
}
public static class Tester {
private String name;
@@ -916,35 +941,6 @@ public class AppProperties {
}
}
public static class ImplementationGuide {
private String url;
private String name;
private String version;
public String getUrl() {
return url;
}
public void setUrl(String url) {
this.url = url;
}
public String getName() {
return name;
}
public void setName(String name) {
this.name = name;
}
public String getVersion() {
return version;
}
public void setVersion(String version) {
this.version = version;
}
}
public static class Validation {
@@ -980,7 +976,6 @@ public class AppProperties {
public void setPartitioning_include_in_search_hashes(Boolean partitioning_include_in_search_hashes) {
this.partitioning_include_in_search_hashes = partitioning_include_in_search_hashes;
}
public Boolean getAllow_references_across_partitions() {
return allow_references_across_partitions;
}
@@ -1020,6 +1015,7 @@ public class AppProperties {
this.email = email;
}
public static class Email {
public String getFrom() {
return from;
@@ -1112,4 +1108,4 @@ public class AppProperties {
public void setEnable_index_of_type(boolean enable_index_of_type) {
this.enable_index_of_type = enable_index_of_type;
}
}
}