add cql translator options

2023-06-15 13:14:48 -06:00
parent af4a5f9d6b
commit 6fe8784860
3 changed files with 303 additions and 2 deletions
--- a/src/main/java/ca/uhn/fhir/jpa/starter/AppProperties.java
+++ b/src/main/java/ca/uhn/fhir/jpa/starter/AppProperties.java
@@ -6,7 +6,13 @@ import ca.uhn.fhir.jpa.api.config.JpaStorageSettings.ClientIdStrategyEnum;
 import ca.uhn.fhir.jpa.model.entity.NormalizedQuantitySearchLevel;
 import ca.uhn.fhir.rest.api.EncodingEnum;
 import com.google.common.collect.ImmutableList;
+import org.cqframework.cql.cql2elm.CqlCompilerException;
+import org.cqframework.cql.cql2elm.CqlTranslator;
+import org.cqframework.cql.cql2elm.CqlTranslatorOptions;
+import org.cqframework.cql.cql2elm.LibraryBuilder;
 import org.hl7.fhir.r4.model.Bundle;
+import org.opencds.cqf.cql.evaluator.CqlOptions;
+import org.opencds.cqf.cql.evaluator.engine.CqlEngineOptions;
 import org.springframework.boot.context.properties.ConfigurationProperties;
 import org.springframework.boot.context.properties.EnableConfigurationProperties;
 import org.springframework.context.annotation.Configuration;
@@ -21,7 +27,56 @@ import java.util.Objects;
@EnableConfigurationProperties
 public class AppProperties {

-  private Boolean cr_enabled = false;
+	private CqlEngineOptions cqlEngineOptions = CqlEngineOptions.defaultOptions();
+	private Boolean cql_use_embedded_libraries = true;
+	private Boolean cql_runtime_debug_logging_enabled= false;
+	private Boolean cql_runtime_enable_validation= false;
+	private Boolean cql_runtime_enable_expression_caching= false;
+	private Boolean cql_compiler_validate_units= true;
+
+	private Boolean cql_compiler_verify_only= false;
+
+	private String cql_compiler_compatibility_level= "1.5";
+
+	private CqlCompilerException.ErrorSeverity cql_compiler_error_level= CqlCompilerException.ErrorSeverity.Info;
+
+	private LibraryBuilder.SignatureLevel cql_compiler_signature_level=LibraryBuilder.SignatureLevel.All;
+
+	private Boolean cql_compiler_analyze_data_requirements= false;
+
+	private Boolean cql_compiler_collapse_data_requirements= false;
+
+	private CqlTranslator.Format cql_compiler_translator_format=CqlTranslator.Format.JSON;
+
+	private Boolean cql_compiler_enable_date_range_optimization= false;
+
+	private Boolean cql_compiler_enable_annotations= false;
+
+	private Boolean cql_compiler_enable_locators = false;
+
+	private Boolean cql_compiler_enable_results_type= false;
+
+	private Boolean cql_compiler_enable_detailed_errors= false;
+
+	private Boolean cql_compiler_disable_list_traversal=false;
+
+	private Boolean cql_compiler_disable_list_demotion=false;
+
+	private Boolean cql_compiler_disable_list_promotion =false;
+
+	private Boolean cql_compiler_enable_interval_demotion=false;
+
+	private Boolean cql_compiler_enable_interval_promotion = false;
+
+	private Boolean cql_compiler_disable_method_invocation= false;
+
+	private Boolean cql_compiler_require_from_keyword= false;
+
+	private Boolean cql_compiler_disable_default_model_info_load= false;
+
+	//private CqlEngineOptions cqlEngineOptions = CqlEngineOptions.defaultOptions();
+	//private CqlTranslatorOptions cqlTranslatorOptions = CqlTranslatorOptions.defaultOptions();
+	private Boolean cr_enabled = false;
  private Boolean ips_enabled = false;
  private Boolean openapi_enabled = false;
  private Boolean mdm_enabled = false;
@@ -151,6 +206,252 @@ public class AppProperties {
    this.partitioning = partitioning;
  }

+	public boolean isCqlUseEmbeddedLibraries() {
+		return cql_use_embedded_libraries;
+	}
+
+	public void setCqlUseEmbeddedLibraries(boolean cql_use_embedded_libraries) {
+		this.cql_use_embedded_libraries = cql_use_embedded_libraries;
+	}
+
+	public boolean isCqlRuntimeDebugLoggingEnabled() {
+		return cql_runtime_debug_logging_enabled;
+	}
+
+	public void setCqlRuntimeDebugLoggingEnabled(boolean cqlRuntimeDebugLoggingEnabled) {
+		this.cql_runtime_debug_logging_enabled = cqlRuntimeDebugLoggingEnabled;
+	}
+
+	public boolean isCqlCompilerValidateUnits() {
+		return cql_compiler_validate_units;
+	}
+
+	public void setCqlCompilerValidateUnits(boolean cqlCompilerValidateUnits) {
+		this.cql_compiler_validate_units = cqlCompilerValidateUnits;
+	}
+
+	public boolean isCqlCompilerVerifyOnly() {
+		return cql_compiler_verify_only;
+	}
+
+	public void setCqlCompilerVerifyOnly(boolean cqlCompilerVerifyOnly) {
+		this.cql_compiler_verify_only = cqlCompilerVerifyOnly;
+	}
+
+	public String getCqlCompilerCompatibilityLevel() {
+		return cql_compiler_compatibility_level;
+	}
+
+	public void setCqlCompilerCompatibilityLevel(String cqlCompilerCompatibilityLevel) {
+		this.cql_compiler_compatibility_level = cqlCompilerCompatibilityLevel;
+	}
+
+	public CqlCompilerException.ErrorSeverity getCqlCompilerErrorSeverityLevel() {
+		return cql_compiler_error_level;
+	}
+
+	public void setCqlCompilerErrorSeverityLevel(CqlCompilerException.ErrorSeverity cqlCompilerErrorSeverityLevel) {
+		this.cql_compiler_error_level = cqlCompilerErrorSeverityLevel;
+	}
+
+	public LibraryBuilder.SignatureLevel getCqlCompilerSignatureLevel() {
+		return cql_compiler_signature_level;
+	}
+
+	public void setCqlCompilerSignatureLevel(LibraryBuilder.SignatureLevel cqlCompilerSignatureLevel) {
+		this.cql_compiler_signature_level = cqlCompilerSignatureLevel;
+	}
+
+	public boolean isCqlCompilerAnalyzeDataRequirements() {
+		return cql_compiler_analyze_data_requirements;
+	}
+
+	public void setCqlCompilerAnalyzeDataRequirements(boolean cqlCompilerAnalyzeDataRequirements) {
+		this.cql_compiler_analyze_data_requirements = cqlCompilerAnalyzeDataRequirements;
+	}
+
+	public boolean isCqlCompilerCollapseDataRequirements() {
+		return cql_compiler_collapse_data_requirements;
+	}
+
+	public void setCqlCompilerCollapseDataRequirements(boolean cqlCompilerCollapseDataRequirements) {
+		this.cql_compiler_collapse_data_requirements = cqlCompilerCollapseDataRequirements;
+	}
+
+	public boolean isEnableDateRangeOptimization() {
+		return cql_compiler_enable_date_range_optimization;
+	}
+
+	public void setEnableDateRangeOptimization(boolean enableDateRangeOptimization) {
+		this.cql_compiler_enable_date_range_optimization = enableDateRangeOptimization;
+	}
+
+	public boolean isEnableAnnotations() {
+		return cql_compiler_enable_annotations;
+	}
+
+	public void setEnableAnnotations(boolean enableAnnotations) {
+		this.cql_compiler_enable_annotations = enableAnnotations;
+	}
+
+	public boolean isEnableLocators() {
+		return cql_compiler_enable_locators;
+	}
+
+	public void setEnableLocators(boolean enableLocators) {
+		this.cql_compiler_enable_locators = enableLocators;
+	}
+
+	public boolean isEnableResultsType() {
+		return cql_compiler_enable_results_type;
+	}
+
+	public void setEnableResultsType(boolean enableResultsType) {
+		this.cql_compiler_enable_results_type = enableResultsType;
+	}
+
+	public boolean isEnableDetailedErrors() {
+		return cql_compiler_enable_detailed_errors;
+	}
+
+	public void setEnableDetailedErrors(boolean enableDetailedErrors) {
+		this.cql_compiler_enable_detailed_errors = enableDetailedErrors;
+	}
+
+	public boolean isDisableListTraversal() {
+		return cql_compiler_disable_list_traversal;
+	}
+
+	public void setDisableListTraversal(boolean disableListTraversal) {
+		this.cql_compiler_disable_list_traversal = disableListTraversal;
+	}
+
+	public boolean isDisableListDemotion() {
+		return cql_compiler_disable_list_demotion;
+	}
+
+	public void setDisableListDemotion(boolean disableListDemotion) {
+		this.cql_compiler_disable_list_demotion = disableListDemotion;
+	}
+
+	public boolean isDisableListPromotion() {
+		return cql_compiler_disable_list_promotion;
+	}
+
+	public void setDisableListPromotion(boolean disableListPromotion) {
+		this.cql_compiler_disable_list_promotion = disableListPromotion;
+	}
+
+	public boolean isEnableIntervalPromotion() {
+		return cql_compiler_enable_interval_promotion;
+	}
+
+	public void setEnableIntervalPromotion(boolean enableIntervalPromotion) {
+		this.cql_compiler_enable_interval_promotion = enableIntervalPromotion;
+	}
+
+	public boolean isEnableIntervalDemotion() {
+		return cql_compiler_enable_interval_demotion;
+	}
+
+	public void setEnableIntervalDemotion(boolean enableIntervalDemotion) {
+		this.cql_compiler_enable_interval_demotion = enableIntervalDemotion;
+	}
+
+	public boolean isDisableMethodInvocation() {
+		return cql_compiler_disable_method_invocation;
+	}
+
+	public void setDisableMethodInvocation(boolean disableMethodInvocation) {
+		this.cql_compiler_disable_method_invocation = disableMethodInvocation;
+	}
+
+	public boolean isRequireFromKeyword() {
+		return cql_compiler_require_from_keyword;
+	}
+
+	public void setRequireFromKeyword(boolean requireFromKeyword) {
+		this.cql_compiler_require_from_keyword = requireFromKeyword;
+	}
+
+	public boolean isDisableDefaultModelInfoLoad() {
+		return cql_compiler_disable_default_model_info_load;
+	}
+
+	public void setDisableDefaultModelInfoLoad(boolean disableDefaultModelInfoLoad) {
+		this.cql_compiler_disable_default_model_info_load = disableDefaultModelInfoLoad;
+	}
+
+	public boolean isCqlRuntimeEnableExpressionCaching() {
+		return cql_runtime_enable_expression_caching;
+	}
+
+	public void setCqlRuntimeEnableExpressionCaching(boolean cqlRuntimeEnableExpressionCaching) {
+		this.cql_runtime_enable_expression_caching = cqlRuntimeEnableExpressionCaching;
+	}
+
+	public boolean isCqlRuntimeEnableValidation() {
+		return cql_runtime_enable_validation;
+	}
+
+	public void setCqlRuntimeEnableValidation(boolean cqlRuntimeEnableValidation) {
+		this.cql_runtime_enable_validation = cqlRuntimeEnableValidation;
+	}
+
+	public CqlTranslator.Format getCqlTranslatorFormat() {
+		return cql_compiler_translator_format;
+	}
+
+	public void setCqlTranslatorFormat(CqlTranslator.Format cqlTranslatorFormat) {
+		this.cql_compiler_translator_format = cqlTranslatorFormat;
+	}
+	private CqlTranslatorOptions cqlTranslatorOptions =
+		new CqlTranslatorOptions(
+			getCqlTranslatorFormat(),
+			cql_compiler_enable_date_range_optimization,
+			cql_compiler_enable_annotations,
+			cql_compiler_enable_locators,
+			cql_compiler_enable_results_type,
+			isCqlCompilerVerifyOnly(),
+			cql_compiler_enable_detailed_errors,
+			getCqlCompilerErrorSeverityLevel(),
+			cql_compiler_disable_list_traversal,
+			cql_compiler_disable_list_demotion,
+			cql_compiler_disable_list_promotion,
+			cql_compiler_enable_interval_demotion,
+			cql_compiler_enable_interval_promotion,
+			cql_compiler_disable_method_invocation,
+			cql_compiler_require_from_keyword,
+			isCqlCompilerValidateUnits(),
+			cql_compiler_disable_default_model_info_load,
+			getCqlCompilerSignatureLevel(),
+			getCqlCompilerCompatibilityLevel()
+		);
+	public CqlTranslatorOptions getCqlTranslator() {
+		return this.cqlTranslatorOptions;
+	}
+
+	public void setCqlTranslator(CqlTranslatorOptions translator) {
+		this.cqlTranslatorOptions = translator;
+	}
+	public CqlEngineOptions getCqlEngineOptions() {
+		return this.cqlEngineOptions;
+	}
+
+	public void setCqlEngineOptions(CqlEngineOptions engine) {
+		this.cqlEngineOptions = engine;
+	}
+
+	public CqlOptions getCqlOptions() {
+		CqlOptions cqlOptions = new CqlOptions();
+		cqlOptions.setUseEmbeddedLibraries(this.cql_use_embedded_libraries);
+		cqlOptions.setCqlEngineOptions(this.getCqlEngineOptions());
+		cqlOptions.setCqlTranslatorOptions(this.getCqlTranslator());
+		return cqlOptions;
+	}
+
+
+
  public Boolean getCr_enabled() {
    return cr_enabled;
  }
--- a/src/main/resources/application.yaml
+++ b/src/main/resources/application.yaml
@@ -61,6 +61,7 @@ hapi:
    ### This flag when enabled to true, will avail evaluate measure operations from CR Module.
    ### Flag is false by default, can be passed as command line argument to override.
    cr_enabled: true
+
    ### enable to use the ApacheProxyAddressStrategy which uses X-Forwarded-* headers
    ### to determine the FHIR server address
    #   use_apache_address_strategy: false
--- a/src/test/java/ca/uhn/fhir/jpa/starter/ExampleServerR4IT.java
+++ b/src/test/java/ca/uhn/fhir/jpa/starter/ExampleServerR4IT.java
@@ -56,7 +56,6 @@ class ExampleServerR4IT implements IServerSupport{
 	private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(ExampleServerR4IT.class);
 	private IGenericClient ourClient;
 	private FhirContext ourCtx;
-
 	private ApplicationContext ctx;

 	@LocalServerPort