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Updated hapi fhir version and all dependencies in the helm chart (#835)

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Co-authored-by: chgl <5307555+chgl@users.noreply.github.com>
This commit is contained in:
chgl
2025-06-26 15:46:10 +02:00
committed by GitHub
parent 89ff121754
commit b126457e2d
6 changed files with 45 additions and 19 deletions
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8
charts/hapi-fhir-jpaserver/Chart.lock
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@@ -1,9 +1,9 @@
dependencies: dependencies:
- name: postgresql - name: postgresql
repository: oci://registry-1.docker.io/bitnamicharts repository: oci://registry-1.docker.io/bitnamicharts
version: 16.5.5 version: 16.7.11
- name: common - name: common
repository: oci://registry-1.docker.io/bitnamicharts repository: oci://registry-1.docker.io/bitnamicharts
version: 2.30.0 version: 2.31.3
digest: sha256:c114b296b53007a7973260de8bad61917fe741c0ad9de15fdbeea5743c8f4910 digest: sha256:e8b5591d28c8b420a68c1bef3ac8530f47c0c9c5d22fddec3c73f45ae5ba615a
generated: "2025-03-21T21:44:22.334197366+01:00" generated: "2025-06-16T13:22:01.211160104+02:00"

20
charts/hapi-fhir-jpaserver/Chart.yaml
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@@ -7,14 +7,14 @@ sources:
- https://github.com/hapifhir/hapi-fhir-jpaserver-starter - https://github.com/hapifhir/hapi-fhir-jpaserver-starter
dependencies: dependencies:
- name: postgresql - name: postgresql
version: 16.5.5 version: 16.7.11
repository: oci://registry-1.docker.io/bitnamicharts repository: oci://registry-1.docker.io/bitnamicharts
condition: postgresql.enabled condition: postgresql.enabled
- name: common - name: common
repository: oci://registry-1.docker.io/bitnamicharts repository: oci://registry-1.docker.io/bitnamicharts
version: 2.30.0 version: 2.31.3
appVersion: 8.0.0 appVersion: 8.2.0
version: 0.19.0 version: 0.20.0
annotations: annotations:
artifacthub.io/license: Apache-2.0 artifacthub.io/license: Apache-2.0
artifacthub.io/containsSecurityUpdates: "false" artifacthub.io/containsSecurityUpdates: "false"
@@ -27,8 +27,14 @@ annotations:
# When using the list of objects option the valid supported kinds are # When using the list of objects option the valid supported kinds are
# added, changed, deprecated, removed, fixed, and security. # added, changed, deprecated, removed, fixed, and security.
- kind: changed - kind: changed
description: "updated postgresql sub-chart to 16.5.5" description: "updated postgresql sub-chart to 16.7.11"
- kind: changed - kind: changed
description: "updated curlimages/curl to 8.12.1" description: "updated common sub-chart to 2.31.3"
- kind: changed - kind: changed
description: "updated hapiproject/hapi to v8.0.0-1" description: "updated curlimages/curl to 8.14.1"
- kind: changed
description: "updated hapiproject/hapi to v8.2.0-1"
- kind: changed
description: "use ca.uhn.fhir.jpa.model.dialect.HapiFhirPostgresDialect dialect"
- kind: changed
description: "made the init container waiting for the database to be ready configurable"

9
charts/hapi-fhir-jpaserver/README.md
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@@ -1,6 +1,6 @@
# HAPI FHIR JPA Server Starter Helm Chart # HAPI FHIR JPA Server Starter Helm Chart
![Version: 0.19.0](https://img.shields.io/badge/Version-0.19.0-informational?style=flat-square) ![Type: application](https://img.shields.io/badge/Type-application-informational?style=flat-square) ![AppVersion: 8.0.0](https://img.shields.io/badge/AppVersion-8.0.0-informational?style=flat-square) ![Version: 0.20.0](https://img.shields.io/badge/Version-0.20.0-informational?style=flat-square) ![Type: application](https://img.shields.io/badge/Type-application-informational?style=flat-square) ![AppVersion: 8.2.0](https://img.shields.io/badge/AppVersion-8.2.0-informational?style=flat-square)
This helm chart will help you install the HAPI FHIR JPA Server in a Kubernetes environment. This helm chart will help you install the HAPI FHIR JPA Server in a Kubernetes environment.
@@ -15,8 +15,8 @@ helm install hapi-fhir-jpaserver hapifhir/hapi-fhir-jpaserver
| Repository | Name | Version | | Repository | Name | Version |
|------------|------|---------| |------------|------|---------|
| oci://registry-1.docker.io/bitnamicharts | common | 2.30.0 | | oci://registry-1.docker.io/bitnamicharts | common | 2.31.3 |
| oci://registry-1.docker.io/bitnamicharts | postgresql | 16.5.5 | | oci://registry-1.docker.io/bitnamicharts | postgresql | 16.7.11 |
## Values ## Values
@@ -39,7 +39,7 @@ helm install hapi-fhir-jpaserver hapifhir/hapi-fhir-jpaserver
| image.pullPolicy | string | `"IfNotPresent"` | image pullPolicy to use | | image.pullPolicy | string | `"IfNotPresent"` | image pullPolicy to use |
| image.registry | string | `"docker.io"` | registry where the HAPI FHIR server image is hosted | | image.registry | string | `"docker.io"` | registry where the HAPI FHIR server image is hosted |
| image.repository | string | `"hapiproject/hapi"` | the path inside the repository | | image.repository | string | `"hapiproject/hapi"` | the path inside the repository |
| image.tag | string | `"v8.0.0-1@sha256:9fbac7b012b4be91ba481e7008f1353ede4598bc99a36f3902b8abf873e70ed8"` | the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image. | | image.tag | string | `"v8.2.0-1@sha256:e85ded02f60e25a66e6d9423ea71f3ebc9494e3a69bdd7d7dbfa31b8aa5b2fe9"` | the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image. |
| imagePullSecrets | list | `[]` | image pull secrets to use when pulling the image | | imagePullSecrets | list | `[]` | image pull secrets to use when pulling the image |
| ingress.annotations | object | `{}` | provide any additional annotations which may be required. Evaluated as a template. | | ingress.annotations | object | `{}` | provide any additional annotations which may be required. Evaluated as a template. |
| ingress.enabled | bool | `false` | whether to create an Ingress to expose the FHIR server HTTP endpoint | | ingress.enabled | bool | `false` | whether to create an Ingress to expose the FHIR server HTTP endpoint |
@@ -84,6 +84,7 @@ helm install hapi-fhir-jpaserver hapifhir/hapi-fhir-jpaserver
| tests.resourcesPreset | string | `"nano"` | set container resources according to one common preset (allowed values: none, nano, micro, small, medium, large, xlarge, 2xlarge). This is ignored if `resources` is set (`resources` is recommended for production). More information: <https://github.com/bitnami/charts/blob/main/bitnami/common/templates/_resources.tpl#L15> | | tests.resourcesPreset | string | `"nano"` | set container resources according to one common preset (allowed values: none, nano, micro, small, medium, large, xlarge, 2xlarge). This is ignored if `resources` is set (`resources` is recommended for production). More information: <https://github.com/bitnami/charts/blob/main/bitnami/common/templates/_resources.tpl#L15> |
| tolerations | list | `[]` | pod tolerations | | tolerations | list | `[]` | pod tolerations |
| topologySpreadConstraints | list | `[]` | pod topology spread configuration see: https://kubernetes.io/docs/concepts/workloads/pods/pod-topology-spread-constraints/#api | | topologySpreadConstraints | list | `[]` | pod topology spread configuration see: https://kubernetes.io/docs/concepts/workloads/pods/pod-topology-spread-constraints/#api |
| waitForDatabaseInitContainer.image | object | `{"pullPolicy":"IfNotPresent","registry":"docker.io","repository":"bitnami/postgresql","tag":"17.5.0-debian-12-r11@sha256:ac8dd0d6512c4c5fb146c16b1c5f05862bd5f600d73348506ab4252587e7fcc6"}` | image to use for the init container which waits until the database is ready to accept connections |
## Development ## Development

10
charts/hapi-fhir-jpaserver/templates/_helpers.tpl
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@@ -150,3 +150,13 @@ Create the JDBC URL from the host, port and database name.
{{- $appName := .Release.Name -}} {{- $appName := .Release.Name -}}
{{ printf "jdbc:postgresql://%s:%d/%s?ApplicationName=%s" $host (int $port) $name $appName }} {{ printf "jdbc:postgresql://%s:%d/%s?ApplicationName=%s" $host (int $port) $name $appName }}
{{- end -}} {{- end -}}
{{/*
Get the container image for the wait-for-db init container t
*/}}
{{- define "hapi-fhir-jpaserver.waitForDatabaseInitContainerImage" -}}
{{- $registry := .Values.waitForDatabaseInitContainer.image.registry -}}
{{- $repository := .Values.waitForDatabaseInitContainer.image.repository -}}
{{- $tag := .Values.waitForDatabaseInitContainer.image.tag -}}
{{ printf "%s/%s:%s" $registry $repository $tag}}
{{- end -}}

4
charts/hapi-fhir-jpaserver/templates/deployment.yaml
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@@ -31,7 +31,7 @@ spec:
{{- toYaml .Values.podSecurityContext | nindent 8 }} {{- toYaml .Values.podSecurityContext | nindent 8 }}
initContainers: initContainers:
- name: wait-for-db-to-be-ready - name: wait-for-db-to-be-ready
image: docker.io/bitnami/postgresql:17.4.0-debian-12-r10@sha256:7b9af9dd759055265998bbf12368e6d7d6326e6fd23f8157be841fad0915c1a1 image: {{ include "hapi-fhir-jpaserver.waitForDatabaseInitContainerImage" . }}
imagePullPolicy: IfNotPresent imagePullPolicy: IfNotPresent
{{- with .Values.restrictedContainerSecurityContext }} {{- with .Values.restrictedContainerSecurityContext }}
securityContext: securityContext:
@@ -99,7 +99,7 @@ spec:
- name: SPRING_DATASOURCE_DRIVERCLASSNAME - name: SPRING_DATASOURCE_DRIVERCLASSNAME
value: org.postgresql.Driver value: org.postgresql.Driver
- name: spring.jpa.properties.hibernate.dialect - name: spring.jpa.properties.hibernate.dialect
value: ca.uhn.fhir.jpa.model.dialect.HapiFhirPostgres94Dialect value: ca.uhn.fhir.jpa.model.dialect.HapiFhirPostgresDialect
- name: HAPI_FHIR_USE_APACHE_ADDRESS_STRATEGY - name: HAPI_FHIR_USE_APACHE_ADDRESS_STRATEGY
value: "true" value: "true"
- name: MANAGEMENT_ENDPOINT_HEALTH_PROBES_ADD_ADDITIONAL_PATHS - name: MANAGEMENT_ENDPOINT_HEALTH_PROBES_ADD_ADDITIONAL_PATHS

13
charts/hapi-fhir-jpaserver/values.yaml
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@@ -7,7 +7,7 @@ image:
# -- the path inside the repository # -- the path inside the repository
repository: hapiproject/hapi repository: hapiproject/hapi
# -- the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image. # -- the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image.
tag: "v8.0.0-1@sha256:9fbac7b012b4be91ba481e7008f1353ede4598bc99a36f3902b8abf873e70ed8" tag: "v8.2.0-1@sha256:e85ded02f60e25a66e6d9423ea71f3ebc9494e3a69bdd7d7dbfa31b8aa5b2fe9"
# -- image pullPolicy to use # -- image pullPolicy to use
pullPolicy: IfNotPresent pullPolicy: IfNotPresent
@@ -241,7 +241,7 @@ curl:
image: image:
registry: docker.io registry: docker.io
repository: curlimages/curl repository: curlimages/curl
tag: 8.12.1@sha256:94e9e444bcba979c2ea12e27ae39bee4cd10bc7041a472c4727a558e213744e6 tag: 8.14.1@sha256:9a1ed35addb45476afa911696297f8e115993df459278ed036182dd2cd22b67b
tests: tests:
# -- whether the service account token should be auto-mounted for the test pods # -- whether the service account token should be auto-mounted for the test pods
@@ -300,3 +300,12 @@ extraVolumes: []
# -- Optionally specify extra list of additional volumeMounts # -- Optionally specify extra list of additional volumeMounts
extraVolumeMounts: [] extraVolumeMounts: []
waitForDatabaseInitContainer:
# -- image to use for the init container which waits until the database
# is ready to accept connections
image:
registry: docker.io
repository: bitnami/postgresql
tag: 17.5.0-debian-12-r11@sha256:ac8dd0d6512c4c5fb146c16b1c5f05862bd5f600d73348506ab4252587e7fcc6
pullPolicy: IfNotPresent