updated helm chart to use version 6.1.0 of the image
This commit is contained in:
chgl
committed by
Jens Kristian Villadsen
Jens Kristian Villadsen
parent
4790c4372f
commit
bdc621e535
@@ -11,29 +11,13 @@ dependencies:
|
||||
repository: https://charts.bitnami.com/bitnami
|
||||
condition: postgresql.enabled
|
||||
appVersion: v6.x
|
||||
version: 0.10.0
|
||||
version: 0.10.1
|
||||
annotations:
|
||||
artifacthub.io/license: Apache-2.0
|
||||
artifacthub.io/changes: |
|
||||
# When using the list of objects option the valid supported kinds are
|
||||
# added, changed, deprecated, removed, fixed, and security.
|
||||
- kind: changed
|
||||
description: |
|
||||
updated included PostgreSQL-subchart to v11.8.1.
|
||||
Fixes `coalesce.go:220: warning: cannot overwrite table with non table for fhirserver.postgresql.primary.topologySpreadConstraints (map[])` warning
|
||||
description: updated image version to v6.1.0
|
||||
- kind: changed
|
||||
description: |
|
||||
set `securityContext.seccompProfile.type=RuntimeDefault` for included PostgreSQL as well as all `initContainer` and Helm
|
||||
test pods to comply with the "restricted" Pod Security Standard: <https://kubernetes.io/docs/concepts/security/pod-security-standards/>
|
||||
- kind: changed
|
||||
description: |
|
||||
use curl as the image for running Helm test pods
|
||||
- kind: changed
|
||||
description: |
|
||||
renamed `metrics` port to `http-metrics` for istio compliant naming
|
||||
- kind: added
|
||||
description: |
|
||||
Helm test job to test metrics endpoint
|
||||
- kind: changed
|
||||
description: |
|
||||
use full digest instead of just a tag for the server image reference
|
||||
description: added section on configuring the chart for distributed tracing to the README.md
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
# HAPI FHIR JPA Server Starter Helm Chart
|
||||
|
||||
  
|
||||
  
|
||||
|
||||
This helm chart will help you install the HAPI FHIR JPA Server in a Kubernetes environment.
|
||||
|
||||
@@ -32,7 +32,7 @@ helm install --render-subchart-notes hapi-fhir-jpaserver hapifhir/hapi-fhir-jpas
|
||||
| image.pullPolicy | string | `"IfNotPresent"` | image pullPolicy to use |
|
||||
| image.registry | string | `"docker.io"` | registry where the HAPI FHIR server image is hosted |
|
||||
| image.repository | string | `"hapiproject/hapi"` | the path inside the repository |
|
||||
| image.tag | string | `"v6.0.1@sha256:63c98d8be3dadc77b47dca3115490f22bf99512f363f779f7bbcb42f569aeac3"` | the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image. |
|
||||
| image.tag | string | `"v6.1.0@sha256:253f87bb1f5b7627f8e25f76a4b0aa7a83f31968c6e111ad74d3cc4ad9ae812e"` | the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image. |
|
||||
| imagePullSecrets | list | `[]` | image pull secrets to use when pulling the image |
|
||||
| ingress.annotations | object | `{}` | provide any additional annotations which may be required. Evaluated as a template. |
|
||||
| ingress.enabled | bool | `false` | whether to create an Ingress to expose the FHIR server HTTP endpoint |
|
||||
@@ -89,8 +89,8 @@ helm install --render-subchart-notes hapi-fhir-jpaserver hapifhir/hapi-fhir-jpas
|
||||
|
||||
## Development
|
||||
|
||||
To update the Helm chart when a new version of the `hapiproject/hapi` image is released, the [Chart.yaml](Chart.yaml)'s
|
||||
`appVersion` and `version` fields need to be updated accordingly. Afterwards, re-generate the [README.md](README.md)
|
||||
To update the Helm chart when a new version of the `hapiproject/hapi` image is released, [values.yaml](values.yaml) `image.tag` and the [Chart.yaml](Chart.yaml)'s
|
||||
`version` and optionally the `appVersion` field on major releases need to be updated. Afterwards, re-generate the [README.md](README.md)
|
||||
by running:
|
||||
|
||||
```sh
|
||||
@@ -99,5 +99,54 @@ INFO[2021-11-20T12:38:04Z] Found Chart directories [charts/hapi-fhir-jpaserver]
|
||||
INFO[2021-11-20T12:38:04Z] Generating README Documentation for chart /usr/src/app/charts/hapi-fhir-jpaserver
|
||||
```
|
||||
|
||||
## Enable Distributed Tracing based on the OpenTelemtry Java Agent
|
||||
|
||||
The container image includes the [OpenTelemetry Java agent JAR](https://github.com/open-telemetry/opentelemetry-java-instrumentation)
|
||||
which can be used to enable distributed tracing. It can be configured entirely using environment variables,
|
||||
see <https://opentelemetry.io/docs/instrumentation/java/automatic/agent-config/> for details.
|
||||
|
||||
Here's an example setup deploying [Jaeger](https://www.jaegertracing.io/) as a tracing backend:
|
||||
|
||||
```sh
|
||||
# required by the Jaeger Operator
|
||||
kubectl apply -f https://github.com/cert-manager/cert-manager/releases/download/v1.9.1/cert-manager.yaml
|
||||
kubectl create namespace observability
|
||||
kubectl create -f https://github.com/jaegertracing/jaeger-operator/releases/download/v1.37.0/jaeger-operator.yaml -n observability
|
||||
|
||||
cat <<EOF | kubectl apply -n observability -f -
|
||||
# simple, all-in-one Jaeger installation. Not suitable for production use.
|
||||
apiVersion: jaegertracing.io/v1
|
||||
kind: Jaeger
|
||||
metadata:
|
||||
name: simplest
|
||||
EOF
|
||||
```
|
||||
|
||||
Use this chart's `extraEnv` value to set the required environment variables:
|
||||
|
||||
```yaml
|
||||
extraEnv:
|
||||
- name: JAVA_TOOL_OPTIONS
|
||||
value: "-javaagent:/app/opentelemetry-javaagent.jar"
|
||||
- name: OTEL_METRICS_EXPORTER
|
||||
value: "none"
|
||||
- name: OTEL_LOGS_EXPORTER
|
||||
value: "none"
|
||||
- name: OTEL_TRACES_EXPORTER
|
||||
value: "jaeger"
|
||||
- name: OTEL_SERVICE_NAME
|
||||
value: "hapi-fhir-jpaserver"
|
||||
- name: OTEL_EXPORTER_JAEGER_ENDPOINT
|
||||
value: "http://simplest-collector.observability.svc:14250"
|
||||
```
|
||||
|
||||
Finally, you can open the Jaeger query UI by running:
|
||||
|
||||
```sh
|
||||
kubectl port-forward -n observability service/simplest-query 16686:16686
|
||||
```
|
||||
|
||||
and opening <http://localhost:16686/> in your browser.
|
||||
|
||||
----------------------------------------------
|
||||
Autogenerated from chart metadata using [helm-docs v1.11.0](https://github.com/norwoodj/helm-docs/releases/v1.11.0)
|
||||
|
||||
@@ -18,8 +18,8 @@ helm install --render-subchart-notes hapi-fhir-jpaserver hapifhir/hapi-fhir-jpas
|
||||
|
||||
## Development
|
||||
|
||||
To update the Helm chart when a new version of the `hapiproject/hapi` image is released, the [Chart.yaml](Chart.yaml)'s
|
||||
`appVersion` and `version` fields need to be updated accordingly. Afterwards, re-generate the [README.md](README.md)
|
||||
To update the Helm chart when a new version of the `hapiproject/hapi` image is released, [values.yaml](values.yaml) `image.tag` and the [Chart.yaml](Chart.yaml)'s
|
||||
`version` and optionally the `appVersion` field on major releases need to be updated. Afterwards, re-generate the [README.md](README.md)
|
||||
by running:
|
||||
|
||||
```sh
|
||||
@@ -28,4 +28,53 @@ INFO[2021-11-20T12:38:04Z] Found Chart directories [charts/hapi-fhir-jpaserver]
|
||||
INFO[2021-11-20T12:38:04Z] Generating README Documentation for chart /usr/src/app/charts/hapi-fhir-jpaserver
|
||||
```
|
||||
|
||||
## Enable Distributed Tracing based on the OpenTelemtry Java Agent
|
||||
|
||||
The container image includes the [OpenTelemetry Java agent JAR](https://github.com/open-telemetry/opentelemetry-java-instrumentation)
|
||||
which can be used to enable distributed tracing. It can be configured entirely using environment variables,
|
||||
see <https://opentelemetry.io/docs/instrumentation/java/automatic/agent-config/> for details.
|
||||
|
||||
Here's an example setup deploying [Jaeger](https://www.jaegertracing.io/) as a tracing backend:
|
||||
|
||||
```sh
|
||||
# required by the Jaeger Operator
|
||||
kubectl apply -f https://github.com/cert-manager/cert-manager/releases/download/v1.9.1/cert-manager.yaml
|
||||
kubectl create namespace observability
|
||||
kubectl create -f https://github.com/jaegertracing/jaeger-operator/releases/download/v1.37.0/jaeger-operator.yaml -n observability
|
||||
|
||||
cat <<EOF | kubectl apply -n observability -f -
|
||||
# simple, all-in-one Jaeger installation. Not suitable for production use.
|
||||
apiVersion: jaegertracing.io/v1
|
||||
kind: Jaeger
|
||||
metadata:
|
||||
name: simplest
|
||||
EOF
|
||||
```
|
||||
|
||||
Use this chart's `extraEnv` value to set the required environment variables:
|
||||
|
||||
```yaml
|
||||
extraEnv:
|
||||
- name: JAVA_TOOL_OPTIONS
|
||||
value: "-javaagent:/app/opentelemetry-javaagent.jar"
|
||||
- name: OTEL_METRICS_EXPORTER
|
||||
value: "none"
|
||||
- name: OTEL_LOGS_EXPORTER
|
||||
value: "none"
|
||||
- name: OTEL_TRACES_EXPORTER
|
||||
value: "jaeger"
|
||||
- name: OTEL_SERVICE_NAME
|
||||
value: "hapi-fhir-jpaserver"
|
||||
- name: OTEL_EXPORTER_JAEGER_ENDPOINT
|
||||
value: "http://simplest-collector.observability.svc:14250"
|
||||
```
|
||||
|
||||
Finally, you can open the Jaeger query UI by running:
|
||||
|
||||
```sh
|
||||
kubectl port-forward -n observability service/simplest-query 16686:16686
|
||||
```
|
||||
|
||||
and opening <http://localhost:16686/> in your browser.
|
||||
|
||||
{{ template "helm-docs.versionFooter" . }}
|
||||
|
||||
@@ -7,7 +7,7 @@ image:
|
||||
# -- the path inside the repository
|
||||
repository: hapiproject/hapi
|
||||
# -- the image tag. As of v5.7.0, this is the `distroless` flavor by default, add `-tomcat` to use the Tomcat-based image.
|
||||
tag: "v6.0.1@sha256:63c98d8be3dadc77b47dca3115490f22bf99512f363f779f7bbcb42f569aeac3"
|
||||
tag: "v6.1.0@sha256:253f87bb1f5b7627f8e25f76a4b0aa7a83f31968c6e111ad74d3cc4ad9ae812e"
|
||||
# -- image pullPolicy to use
|
||||
pullPolicy: IfNotPresent
|
||||
|
||||
|
||||
Reference in New Issue
Block a user