Personal-Twin/hapi-fhir-jpaserver-starter
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558 Commits

Author SHA1 Message Date
Brenin Rhodes
6b98988c6f Update Clinical Reasoning plugin (#692) 
* Reproducing issues with CR/HAPI cds-hooks processing

* Add new $questionnaire operation

* Update StarterIpsConfig.java

* Update pom.xml

* Fixes for configuration properties

* Update VS Code launch properties

* Fixes for CQL logging

* Update pom.xml

* Remove unused threaded option

* Update to 7.1.7

* Fix some CR defaults

* Update to new snapshot

* Update pom.xml

* Fix test settings

* Do not make prefetch calls if all items are present

* Add alternative application.yaml for CDS settings.

* Add CdsHook tests and documentation

* Comment out custom prefetch until it is more mature

* Removal of DataEndpoint parameter is not longer needed

* Fix debug logging setting being overwritten

* Revert change

* Remove unused class

* Adding Rec10 Test

* Disable test until fixed

* fix tests

---------

Co-authored-by: c-schuler <hoofschu@gmail.com>
Co-authored-by: Jonathan Percival <jonathan.i.percival@gmail.com>
 2024-06-30 12:14:35 +02:00
dotasek
ab02bfeeb0 Merge branch 'master' into rel_7_3_tracking 2024-06-25 11:08:28 -04:00
dotasek
db238aa9ec Fix subscription settings config in integration tests 2024-06-17 18:46:12 -04:00
dotasek
8f731a29ee WIP bump HAPI 2024-06-17 17:10:19 -04:00
Michele Adduci
6cf5ffb559 Updated parent to FHIR 7.2.1 (#695) 
* Updated parent to FHIR 7.2.1

* Updated chart

* Updated chart

* Fixing linter issues in Helm

* Fixing linter issues for Helm, updated REAMDE
 2024-06-14 21:32:55 +02:00
Carl Anderson
255031b26f fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:19:09 -05:00
Carl Anderson
0d8642ddfa fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:18:52 -05:00
Carl Anderson
74344279e2 fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:18:35 -05:00
Carl Anderson
ce0df03aac fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:18:17 -05:00
Carl Anderson
9a02b13285 fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:18:01 -05:00
Carl Anderson
37c26a464a fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:17:35 -05:00
Carl Anderson
40411f6fb8 fix: use the existing naming convention 
Co-authored-by: Kevin Dougan SmileCDR <72025369+KevinDougan-SmileCDR@users.noreply.github.com>
 2024-06-14 11:17:06 -05:00
Carl Anderson
056c9a16b2 fix: use the correct function name 2024-06-13 16:01:53 -05:00
Carl Anderson
d4db8fbb1b fix: forgot to include a setter with my getter 2024-06-12 14:16:17 -05:00
Carl Anderson
7ef0e0614d typo 2024-06-12 12:03:03 -05:00
Carl Anderson
2239fe5b45 enable mass ingestion mode 2024-06-12 12:02:05 -05:00
Carl Anderson
cc51fa6082 enable mass ingestion mode 2024-06-12 12:00:26 -05:00
Carl Anderson
fe18cce023 enable mass ingestion mode 2024-06-12 11:56:31 -05:00
dotasek.dev
a843f9b42e Merge remote-tracking branch 'origin/master' into rel_7_1_tracking 2024-05-07 11:36:10 -04:00
Muazzam Khan
c10e84e333 issue-5884-Add-Config-Resource-History : Adding configuration for Disabling Resource History. 2024-04-29 18:12:24 -04:00
dotasek.dev
1d3342de0e Merge branch 'master' into rel_7_1_tracking 2024-04-29 09:23:49 -04:00
dotasek
9a9cc8bf2d Merge pull request #672 from hapifhir/671-update-run-instructions 
671 - Updated the run instructions.
 2024-04-23 18:05:16 -04:00
Jens Kristian Villadsen
31e64f6bab Added exposure of job controller API (#678) 2024-04-23 14:10:02 +02:00
Kevin Dougan
9c4f374964 Changed the instructions on how to change the server port. 2024-04-19 16:00:15 -04:00
dotasek.dev
70da0dc7a7 Bump HAPI version, switch to DatabaseBinaryContentStorageSvcImpl 2024-04-19 14:02:43 -04:00
dotasek.dev
79c43b48be Bump HAPI version, fix deleted method in Cr properties 2024-04-09 11:29:48 -04:00
dotasek.dev
79d5441ad5 Bump version + update API 2024-03-11 10:39:23 -04:00
Matteo Steccolini
7c76755f46 fix fhir version of Parameters for ImplementationGuideR5OperationProvider.uninstall (when using R5 and enabling ig_runtime_upload_enabled, the application won't start) (#658) 2024-03-06 17:27:46 +01:00
Joshua Grisham
01a488aeb3 Allow all client_id_strategy options and add server_id_strategy (#653) 2024-03-03 17:39:26 +01:00
David Conlan
4226648867 Allow custom operations/providers in addition to interceptors (#654) 
* Allow custom operations/providers to be added in the same way custom interceptors are currently loaded

* Add new property to documentation and default yaml file

* Add test for custom operation
 2024-03-03 17:39:03 +01:00
Jens Kristian Villadsen
1e7690fc03 Adding configurable behaviour for https://github.com/hapifhir/hapi-fhir/pull/5300 (#650) 2024-02-27 21:38:43 +01:00
dotasek.dev
eae61fd68a Merge remote-tracking branch 'origin/master' into ja_20231203_hapi_7_0 2024-02-27 14:37:31 -05:00
Jens Kristian Villadsen
9e21d8062e Feature/dynamic content (#605) 
* Added dynamic content options

* Added defaults

* Added sane defaults

* Added IG operation providers for run time installation of IG's

* Refactored conditions for enabling the provider

* Refactoring

* Disable it by default in config as well

* document package install feature

* Added hosting options

* Provided better custom defaults

* Removed double default files

---------

Co-authored-by: Jose Costa Teixeira <jose.a.teixeira@gmail.com>
 2024-02-15 20:02:46 +01:00
Jens Kristian Villadsen
372ef4b6c9 fix: added setLoadSynchronousUpTo to validation searches on Structu… (#645) 
* fix: added `setLoadSynchronousUpTo` to validation searches on StructureDefinition

* chore: adjusted to comments
 2024-02-14 09:28:11 +01:00
Jens Kristian Villadsen
7e82e63fc2 added missing uninstall (#643) 2024-02-14 08:32:27 +01:00
Jens Kristian Villadsen
bb8f620d91 fix: reintroduced configurable condition on tester (#644) 2024-02-14 08:31:53 +01:00
Luke deGruchy
164e0a98c9 Merge remote-tracking branch 'origin/master' into ja_20231203_hapi_7_0 2024-02-12 09:08:00 -05:00
Mohamed Marrouchi
dab4219bb1 feat: add support for logical urls 2024-02-06 15:54:08 +01:00
Matteo Steccolini
d762c18765 requested changes: upgrade to hapi-fhir-7.0.0-SNAPSHOT, removed empty JpaStarterWebsocketDispatcherConfig and references 
unrequested changes: commons-logging dependency marked provided (to avoid redundant jar inclusion), removed unused imports in classes that were modified
 2024-01-25 08:53:29 +01:00
Matteo Steccolini
0a95e71cbc fixed integration test execution; tests are now done with tomcat, unless "jetty" profile is active (in which case they're done with jetty) 
Test class JpaStarterWebsocketDispatcherConfig emptied, not sure if necessary (it's now missing jetty dependencies)
 2024-01-03 15:12:38 +01:00
Matteo Steccolini
142191b2bd unused imports in Application.java 2023-12-21 16:58:28 +01:00
Matteo Steccolini
e49a9219af servletWebServerFactory definitely breaks things (spring-boot not starting with tomcat, and running as web application doesn't work if the bean is not at least lazy) 
I'm removing it, it shouldn't be necessary (to run spring-spring boot with jetty, it's enough to enable the jetty profile?)
 2023-12-21 11:54:23 +01:00
Matteo Steccolini
eafa7cfb4c servletWebServerFactory made lazy to run as web application 2023-12-18 09:07:59 +01:00
James Agnew
55e06699de Merge branch 'master' into ja_20231203_hapi_7_0 2023-12-15 09:42:24 -05:00
James Agnew
b746573253 Enable subscriptions and upgrade to jetty 12 2023-12-15 08:56:17 -05:00
Jens Kristian Villadsen
9c557e2c80 Cleaned up for running boot as default (#620) 2023-12-05 19:56:31 +01:00
Levi
0be636c169 Affected Issue(s): #606 (#612) 
What this commit has achieved:
1. Externalized location of "mdm-rules.json" in the `AppProperties`
2. More info about the `ResourceLoader` interface is available at
https://docs.spring.io/spring-framework/reference/core/resources.html#resources-resourceloader
 2023-12-04 21:10:21 +01:00
Levi
41a537efb2 Affected Issue(s): #611 (#617) 
* Affected Issue(s): #611

What this commit has achieved:
1. MDM requires an implementation of `INicknameSvc`, it was instantiated
in `NicknameServiceConfig`
The error message regarding this was:
```
APPLICATION FAILED TO START

Description:

Parameter 2 of method matcherFactory in
ca.uhn.fhir.jpa.mdm.config.MdmCommonConfig required a bean of type
'ca.uhn.fhir.jpa.nickname.INicknameSvc' that could not be found.

Action:

Consider defining a bean of type 'ca.uhn.fhir.jpa.nickname.INicknameSvc'
in your configuration.
```
2. MDM requires the subscription of type message
The error message regarding this was:
```
2023-12-01 11:34:03
org.springframework.beans.factory.BeanCreationException: Error creating
bean with name 'mdmSubmitterInterceptorLoader': Invocation of init
method failed; nested exception is
ca.uhn.fhir.context.ConfigurationException: HAPI-2421: MDM requires
Message Subscriptions to be enabled in the Storage Settings
```

* Affected Issue(s): #611

What this commit has achieved:
1. Added Integration Test for future-proof
 2023-12-04 21:07:51 +01:00
James Agnew
0133663fbc Update to HAPI FHIR 7.0.0 Draft 2023-12-03 14:23:05 -05:00
Justin McKelvy
d1c6b0661d new ide formatting 2023-11-28 11:08:59 -07:00