Added boot application

pom.xml

@@ -2,6 +2,7 @@
     xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
     <modelVersion>4.0.0</modelVersion>
 
+    <!-- mvn clean package spring-boot:repackage && java -jar target/hapi-fhir-jpaserver.war -->
     <!--
     Note: HAPI projects use the "hapi-fhir" POM as their base to provide easy management.
     You do not need to use this in your own projects, so the "parent" tag and it's
@@ -117,7 +118,7 @@
             <artifactId>hapi-fhir-testpage-overlay</artifactId>
             <version>${project.version}</version>
             <classifier>classes</classifier>
-            <scope>provided</scope>
+
         </dependency>
 
         <!-- HAPI-FHIR uses Logback for logging support. The logback library is included automatically by Maven as a part of the hapi-fhir-base dependency, but you also need to include a logging library. Logback
@@ -275,33 +276,19 @@
             <scope>test</scope>
         </dependency>
 
-        <dependency>
-            <groupId>org.springframework.boot</groupId>
-            <artifactId>spring-boot-starter</artifactId>
-            <version>2.3.3.RELEASE</version>
-            <scope>test</scope>
-        </dependency>
-
-        <dependency>
-            <groupId>org.springframework.boot</groupId>
-            <artifactId>spring-boot-starter-web</artifactId>
-            <version>2.3.3.RELEASE</version>
-            <scope>test</scope>
-        </dependency>
-
         <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-tomcat -->
         <dependency>
             <groupId>org.springframework.boot</groupId>
             <artifactId>spring-boot-starter-tomcat</artifactId>
             <version>2.3.3.RELEASE</version>
-            <scope>test</scope>
+
 
         </dependency>
         <dependency>
             <groupId>org.springframework.boot</groupId>
             <artifactId>spring-boot-autoconfigure</artifactId>
             <version>2.3.3.RELEASE</version>
-            <scope>test</scope>
+
         </dependency>
 
 
@@ -332,6 +319,20 @@
         <finalName>hapi-fhir-jpaserver</finalName>
 
         <plugins>
+            <plugin>
+                <groupId>org.springframework.boot</groupId>
+                <artifactId>spring-boot-maven-plugin</artifactId>
+                <executions>
+                    <execution>
+                        <goals>
+                            <goal>repackage</goal>
+                        </goals>
+                        <configuration>
+                            <mainClass>ca.uhn.fhir.jpa.starter.Application</mainClass>
+                        </configuration>
+                    </execution>
+                </executions>
+            </plugin>
             <!-- The following is not required for the application to build, but allows you to test it by issuing "mvn jetty:run" from the command line. -->
             <plugin>
                 <groupId>org.eclipse.jetty</groupId>

src/main/java/ca/uhn/fhir/jpa/starter/Application.java

@@ -0,0 +1,42 @@
+package ca.uhn.fhir.jpa.starter;
+
+import org.springframework.boot.SpringApplication;
+import org.springframework.boot.autoconfigure.SpringBootApplication;
+import org.springframework.boot.autoconfigure.elasticsearch.ElasticsearchRestClientAutoConfiguration;
+import org.springframework.boot.web.servlet.ServletComponentScan;
+import org.springframework.boot.web.servlet.ServletRegistrationBean;
+import org.springframework.context.annotation.Bean;
+import org.springframework.web.context.support.AnnotationConfigWebApplicationContext;
+import org.springframework.web.servlet.DispatcherServlet;
+
+@ServletComponentScan(basePackageClasses = {JpaRestfulServer.class})
+@SpringBootApplication(exclude = ElasticsearchRestClientAutoConfiguration.class)
+public class Application {
+
+  public static void main(String[] args) {
+
+    System.setProperty("spring.profiles.active", "r4");
+    System.setProperty("spring.batch.job.enabled", "false");
+    SpringApplication.run(Application.class, args);
+
+    //Server is now accessible at eg. http://localhost:8080/fhir/metadata
+  }
+
+  @Bean
+  public ServletRegistrationBean servletRegistrationBean() {
+
+    AnnotationConfigWebApplicationContext ctx = new AnnotationConfigWebApplicationContext();
+
+    ctx.register(FhirTesterConfig.class);
+
+    DispatcherServlet api = new DispatcherServlet(ctx);
+    api.setContextClass(AnnotationConfigWebApplicationContext.class);
+    api.setContextConfigLocation(FhirTesterConfig.class.getName());
+    ServletRegistrationBean registrationBean = new ServletRegistrationBean();
+    registrationBean.setServlet(api);
+    registrationBean.addUrlMappings("/*");
+    registrationBean.setLoadOnStartup(1);
+    return registrationBean;
+
+  }
+}

src/main/java/ca/uhn/fhir/jpa/starter/JpaRestfulServer.java

@@ -3,7 +3,7 @@ package ca.uhn.fhir.jpa.starter;
 import javax.servlet.ServletException;
 import javax.servlet.annotation.WebServlet;
 
-@WebServlet
+@WebServlet(urlPatterns = {"/fhir/*"})
 public class JpaRestfulServer extends BaseJpaRestfulServer {
 
   private static final long serialVersionUID = 1L;

src/main/resources/hapi.properties

@@ -11,7 +11,7 @@ fhir_version=R4
 # (the web UI similar to the one at http://hapi.fhir.org) will use to
 # connect internally to the FHIR server, so this also needs to be a name
 # accessible from the server itself.
-server_address=http://localhost:8080/hapi-fhir-jpaserver/fhir/
+server_address=http://localhost:8080/fhir
 
 enable_index_missing_fields=false
 auto_create_placeholder_reference_targets=false