* updated helm chart to use latest v6.0.1 version of the image * updated workflow to run against multiple k8s versions
156 lines
5.5 KiB
YAML
156 lines
5.5 KiB
YAML
apiVersion: apps/v1
|
|
kind: Deployment
|
|
metadata:
|
|
name: {{ include "hapi-fhir-jpaserver.fullname" . }}
|
|
labels:
|
|
{{- include "hapi-fhir-jpaserver.labels" . | nindent 4 }}
|
|
{{- with .Values.deploymentAnnotations }}
|
|
annotations:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
spec:
|
|
replicas: {{ .Values.replicaCount }}
|
|
selector:
|
|
matchLabels:
|
|
{{- include "hapi-fhir-jpaserver.selectorLabels" . | nindent 6 }}
|
|
template:
|
|
metadata:
|
|
{{- with .Values.podAnnotations }}
|
|
annotations:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
labels:
|
|
{{- include "hapi-fhir-jpaserver.selectorLabels" . | nindent 8 }}
|
|
spec:
|
|
{{- with .Values.imagePullSecrets }}
|
|
imagePullSecrets:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
securityContext:
|
|
{{- toYaml .Values.podSecurityContext | nindent 8 }}
|
|
initContainers:
|
|
- name: wait-for-db-to-be-ready
|
|
image: docker.io/bitnami/postgresql:14.3.0-debian-10-r20
|
|
imagePullPolicy: IfNotPresent
|
|
securityContext:
|
|
allowPrivilegeEscalation: false
|
|
readOnlyRootFilesystem: true
|
|
privileged: false
|
|
capabilities:
|
|
drop:
|
|
- ALL
|
|
runAsNonRoot: true
|
|
runAsUser: 1001
|
|
runAsGroup: 1001
|
|
env:
|
|
- name: PGHOST
|
|
value: "{{ include "hapi-fhir-jpaserver.database.host" . }}"
|
|
- name: PGPORT
|
|
value: "{{ include "hapi-fhir-jpaserver.database.port" . }}"
|
|
- name: PGUSER
|
|
value: "{{ include "hapi-fhir-jpaserver.database.user" . }}"
|
|
command: ["/bin/sh", "-c"]
|
|
args:
|
|
- |
|
|
until pg_isready; do
|
|
echo "Waiting for DB ${PGUSER}@${PGHOST}:${PGPORT} to be up";
|
|
sleep 15;
|
|
done;
|
|
containers:
|
|
- name: {{ .Chart.Name }}
|
|
securityContext:
|
|
{{- toYaml .Values.securityContext | nindent 12 }}
|
|
image: {{ .Values.image.registry }}/{{ .Values.image.repository }}:{{ default .Chart.AppVersion .Values.image.tag }}
|
|
imagePullPolicy: {{ .Values.image.pullPolicy }}
|
|
ports:
|
|
- name: http
|
|
containerPort: 8080
|
|
protocol: TCP
|
|
- name: metrics
|
|
containerPort: 8081
|
|
protocol: TCP
|
|
startupProbe:
|
|
httpGet:
|
|
path: /readyz
|
|
port: http
|
|
{{- with .Values.startupProbe }}
|
|
initialDelaySeconds: {{ .initialDelaySeconds }}
|
|
periodSeconds: {{ .periodSeconds }}
|
|
timeoutSeconds: {{ .timeoutSeconds }}
|
|
successThreshold: {{ .successThreshold }}
|
|
failureThreshold: {{ .failureThreshold }}
|
|
{{- end }}
|
|
readinessProbe:
|
|
httpGet:
|
|
path: /readyz
|
|
port: http
|
|
{{- with .Values.readinessProbe }}
|
|
initialDelaySeconds: {{ .initialDelaySeconds }}
|
|
periodSeconds: {{ .periodSeconds }}
|
|
timeoutSeconds: {{ .timeoutSeconds }}
|
|
successThreshold: {{ .successThreshold }}
|
|
failureThreshold: {{ .failureThreshold }}
|
|
{{- end }}
|
|
livenessProbe:
|
|
httpGet:
|
|
path: /livez
|
|
port: http
|
|
{{- with .Values.livenessProbe }}
|
|
initialDelaySeconds: {{ .initialDelaySeconds }}
|
|
periodSeconds: {{ .periodSeconds }}
|
|
timeoutSeconds: {{ .timeoutSeconds }}
|
|
successThreshold: {{ .successThreshold }}
|
|
failureThreshold: {{ .failureThreshold }}
|
|
{{- end }}
|
|
resources:
|
|
{{- toYaml .Values.resources | nindent 12 }}
|
|
env:
|
|
- name: SPRING_DATASOURCE_URL
|
|
value: {{ include "hapi-fhir-jpaserver.database.jdbcUrl" $ }}
|
|
- name: SPRING_DATASOURCE_USERNAME
|
|
value: {{ include "hapi-fhir-jpaserver.database.user" $ }}
|
|
- name: SPRING_DATASOURCE_PASSWORD
|
|
valueFrom:
|
|
secretKeyRef:
|
|
name: {{ include "hapi-fhir-jpaserver.postgresql.secretName" . }}
|
|
key: {{ include "hapi-fhir-jpaserver.postgresql.secretKey" . }}
|
|
- name: SPRING_DATASOURCE_DRIVERCLASSNAME
|
|
value: org.postgresql.Driver
|
|
- name: spring.jpa.properties.hibernate.dialect
|
|
value: ca.uhn.fhir.jpa.model.dialect.HapiFhirPostgres94Dialect
|
|
- name: HAPI_FHIR_USE_APACHE_ADDRESS_STRATEGY
|
|
value: "true"
|
|
- name: MANAGEMENT_ENDPOINT_HEALTH_PROBES_ADD_ADDITIONAL_PATHS
|
|
value: "true"
|
|
- name: MANAGEMENT_SERVER_PORT
|
|
value: "8081"
|
|
{{- if .Values.extraEnv }}
|
|
{{ toYaml .Values.extraEnv | nindent 12 }}
|
|
{{- end }}
|
|
volumeMounts:
|
|
- mountPath: /tmp
|
|
name: tmp-volume
|
|
- mountPath: /app/target
|
|
name: lucenefiles-volume
|
|
{{- with .Values.nodeSelector }}
|
|
nodeSelector:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
{{- with .Values.affinity }}
|
|
affinity:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
{{- with .Values.tolerations }}
|
|
tolerations:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
{{- with .Values.topologySpreadConstraints }}
|
|
topologySpreadConstraints:
|
|
{{- toYaml . | nindent 8 }}
|
|
{{- end }}
|
|
volumes:
|
|
- name: tmp-volume
|
|
emptyDir: {}
|
|
- name: lucenefiles-volume
|
|
emptyDir: {}
|